Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Others
Cell type
Fibrosarcoma
MeSH Description
A sarcoma derived from deep fibrous tissue, characterized by bundles of immature proliferating fibroblasts with variable collagen formation, which tends to invade locally and metastasize by the bloodstream. (Stedman, 25th ed)

Attributes by original data submitter

Sample

GEO Accession
GSM1103553
tissue origin
derived from biopsy of fibrosarcoma of Human male
treatment
curaxin
antibody
none, input

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
173677204
Reads aligned (%)
93.8
Duplicates removed (%)
82.8
Number of peaks
25563 (qval < 1E-05)

hg19

Number of total reads
173677204
Reads aligned (%)
93.3
Duplicates removed (%)
83.1
Number of peaks
25435 (qval < 1E-05)

Base call quality data from DBCLS SRA