Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SSRP1

Cell type

Cell type Class
Others
Cell type
Fibrosarcoma
MeSH Description
A sarcoma derived from deep fibrous tissue, characterized by bundles of immature proliferating fibroblasts with variable collagen formation, which tends to invade locally and metastasize by the bloodstream. (Stedman, 25th ed)

Attributes by original data submitter

Sample

GEO Accession
GSM1103544
tissue origin
derived from biopsy of fibrosarcoma of Human male
treatment
none
antibody
SSRP1 (Biolegend, cat#609702, clone:10D1)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
98560640
Reads aligned (%)
62.5
Duplicates removed (%)
33.1
Number of peaks
3434 (qval < 1E-05)

hg38

Number of total reads
98560640
Reads aligned (%)
64.1
Duplicates removed (%)
31.8
Number of peaks
3708 (qval < 1E-05)

Base call quality data from DBCLS SRA