SRX253193
GSM1103379: IgG ChIPseq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
BMiFLT3 (15-3) cells
cell line
BMiFLT3(15-3)
cell type
proB cells from a murine BCP-ALL
genetic modification
cells transduced with Runx1-ERt2
chip-seq antibody
rabbit anti-IgG [Abcam,catalog #37415, lot #905012]

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
54255084
Reads aligned (%)
98.9
Duplicates removed (%)
35.3
Number of peaks
1289 (qval < 1E-05)

mm9

Number of total reads
54255084
Reads aligned (%)
98.6
Duplicates removed (%)
35.3
Number of peaks
1270 (qval < 1E-05)

Base call quality data from DBCLS SRA