SRX253097
GSM1103354: INPUT; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Megakaryocytes
MeSH Description
Very large BONE MARROW CELLS which release mature BLOOD PLATELETS.

Attributes by original data submitter

Sample

GEO Accession
GSM1103354
strain/background
C57BL
genotype
WT
cell type
megakaryocyte cells
chip antibody
non-immune serum

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
27061375
Reads aligned (%)
81.3
Duplicates removed (%)
24.9
Number of peaks
505 (qval < 1E-05)

mm9

Number of total reads
27061375
Reads aligned (%)
81.0
Duplicates removed (%)
24.9
Number of peaks
603 (qval < 1E-05)

Base call quality data from DBCLS SRA