Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
Monocytes-CD14+
Tissue
monocytes
Lineage
mesoderm
Description
Monocytes-CD14+ are CD14-positive cells from human leukapheresis production, from donor RO 01746 (draw 1 ID is RO 01746, draw 2 ID is RO 01826), newly promoted to tier 2: not in 2011 analysis

Attributes by original data submitter

Sample

MOLECULE
genomic DNA
DISEASE
None
BIOMATERIAL_PROVIDER
FHCRC HEIMFELD
BIOMATERIAL_TYPE
Primary Cell
CELL_TYPE
CD14 Primary Cells
MARKERS
CD14+
DONOR_ID
RO 01679
DONOR_AGE
year 21
DONOR_HEALTH_STATUS
NA
DONOR_SEX
male
DONOR_ETHNICITY
Caucasian
PASSAGE_IF_EXPANDED
NA
sample_term_id
CL_0001054

Sequenced DNA Library

library_name
Histone.DS22405
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
29112713
Reads aligned (%)
94.2
Duplicates removed (%)
2.5
Number of peaks
6558 (qval < 1E-05)

hg19

Number of total reads
29112713
Reads aligned (%)
93.8
Duplicates removed (%)
3.2
Number of peaks
6502 (qval < 1E-05)

Base call quality data from DBCLS SRA