Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
female embryonic cells
cell type
embryonic (established from 6-12hours embryo)
cell line
Kc167
chip antibody
RNAPII (gift from John T. Lis; Adelman et al., Mol. Cell, 2005)
treatment
Heat shocked

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
20595171
Reads aligned (%)
70.1
Duplicates removed (%)
28.8
Number of peaks
9662 (qval < 1E-05)

dm3

Number of total reads
20595171
Reads aligned (%)
70.3
Duplicates removed (%)
27.3
Number of peaks
11988 (qval < 1E-05)

Base call quality data from DBCLS SRA