SRX252225
GSM1101655: HS CP190 ChIP-seq; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Cp190

Cell type

Cell type Class
Cell line
Cell type
Kc167
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
female embryonic cells
cell type
embryonic (established from 6-12hours embryo)
cell line
Kc167
chip antibody
CP190 (Bushey et al., Genes & Dev. 2009)
treatment
Heat shocked

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
20972495
Reads aligned (%)
63.6
Duplicates removed (%)
20.4
Number of peaks
10628 (qval < 1E-05)

dm6

Number of total reads
20972495
Reads aligned (%)
63.4
Duplicates removed (%)
22.4
Number of peaks
9149 (qval < 1E-05)

Base call quality data from DBCLS SRA