Antigen

Antigen Class

TFs and others

Antigen

Tox

Cell type

Cell type Class

Blood

Cell type

OT-1

NA

NA

Sample

source_name

adoptively transferred OT-1

cell line

OT-1

genotype

wild type

pathogen

LCMV-OVA

strain

C57BL/6

chip antibody

Rabbit anti-TOX1 antibody (Abcam ab155768, lot GR124281-8)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

OT-1 chromatin was sonicated and TOX-DNA complexes were isolated with antibody. Libraries were prepared according to Illumina's instructions using the Truseq ChIP-seq protocol.

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

24317258

Reads aligned (%)

86.9

Duplicates removed (%)

45.6

Number of peaks

3111 (qval < 1E-05)

mm9

Number of total reads

24317258

Reads aligned (%)

86.7

Duplicates removed (%)

45.7

Number of peaks

3084 (qval < 1E-05)