Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ERCC3

Cell type

Cell type Class
Bone
Cell type
HT-1080
Primary Tissue
Bone
Tissue Diagnosis
Fibrosarcoma

Attributes by original data submitter

Sample

source_name
HT1080_XPB_ChIP_Seq
cell line
HT1080
cell type
Fibrosarcoma cells
chip antibody
Rabbit Polyclonal anti-XPB
chip antibody vendor
Novus Biologicals

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
63379918
Reads aligned (%)
58.5
Duplicates removed (%)
6.4
Number of peaks
3525 (qval < 1E-05)

hg38

Number of total reads
63379918
Reads aligned (%)
58.8
Duplicates removed (%)
6.3
Number of peaks
3450 (qval < 1E-05)

Base call quality data from DBCLS SRA