Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
MS4221
NA
NA

Attributes by original data submitter

Sample

GEO Accession
GSM1089633
cell type
Lymphoblast
chip antibody
None
cell line
MS4221

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
63914453
Reads aligned (%)
96.2
Duplicates removed (%)
13.4
Number of peaks
606 (qval < 1E-05)

hg38

Number of total reads
63914453
Reads aligned (%)
97.6
Duplicates removed (%)
12.2
Number of peaks
1388 (qval < 1E-05)

Base call quality data from DBCLS SRA