SRX245833
GSM1088966: chico input 1; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Adult
Cell type
Adult female
NA
NA

Attributes by original data submitter

Sample

source_name
female adult flies
strain
chico heterozygous mutants
age
15-day-old
chip antibody
none
gender
female
genotype
chico heterozygous mutants
tissue
whole organism

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
28288635
Reads aligned (%)
95.2
Duplicates removed (%)
11.0
Number of peaks
3052 (qval < 1E-05)

dm3

Number of total reads
28288635
Reads aligned (%)
95.5
Duplicates removed (%)
8.1
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA