Antigen

Antigen Class

TFs and others

Antigen

SMC1A

Cell type

Cell type Class

Blood

Cell type

GM12878

Tissue

blood

Lineage

mesoderm

Description

B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

Sample

source_name

SMC1A ChIP-Seq

biomaterial_provider

CC

cell line

GM12878

cell type

LCL from B-Lymphocyte

chip antibody

SMC1A (Bethyl, A300-055A)

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

28546530

Reads aligned (%)

94.9

Duplicates removed (%)

4.7

Number of peaks

39208 (qval < 1E-05)

hg19

Number of total reads

28546530

Reads aligned (%)

94.5

Duplicates removed (%)

5.1

Number of peaks

40707 (qval < 1E-05)