Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MYC

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa cells, Myc ChIP
cell line
HeLa
chip antibody
c-Myc antibody (N262) [Santa Cruz, catalog# sc764]

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
24767282
Reads aligned (%)
62.3
Duplicates removed (%)
12.4
Number of peaks
6757 (qval < 1E-05)

hg38

Number of total reads
24767282
Reads aligned (%)
63.7
Duplicates removed (%)
11.3
Number of peaks
6893 (qval < 1E-05)

Base call quality data from DBCLS SRA