Antigen

Antigen Class

TFs and others

Antigen

Ctcf

Cell type

Cell type Class

Blood

Cell type

Plasmablasts

NA

NA

Sample

source_name

splenic Plasmablasts

chip antibody

CTCF

chip antibody manufacturer

Millipore

cell type

splenic Plasmablasts

strain

C57BL/6

cell surface markers

CD138+

cell isolation

Plasmablasts were induced by injecting 6-week old mice with 50 ug LPS retro-orbitally. 3 days post-injection spleens were harvested and plasmablasts purified by flow cytometry based on surface expression of CD138.

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

129073920

Reads aligned (%)

78.9

Duplicates removed (%)

65.3

Number of peaks

28257 (qval < 1E-05)

mm9

Number of total reads

129073920

Reads aligned (%)

78.7

Duplicates removed (%)

65.4

Number of peaks

28283 (qval < 1E-05)