SRX244285
GSM1087142: E11.5 heart, Input; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Embryonic heart
NA
NA

Attributes by original data submitter

Sample

source_name
E11.5 heart, Input
strain
Parkes
developmental stage
E11.5
tissue
heart

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
26418115
Reads aligned (%)
85.9
Duplicates removed (%)
52.5
Number of peaks
372 (qval < 1E-05)

mm9

Number of total reads
26418115
Reads aligned (%)
85.8
Duplicates removed (%)
52.6
Number of peaks
398 (qval < 1E-05)

Base call quality data from DBCLS SRA