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Install and launch IGV before selecting data to visualize
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: BCL6
wikigenes
PDBj
CellType: OCI-LY-7
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX244191
GSM1084801: BCL6; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
BCL6
Cell type
Cell type Class
Blood
Cell type
OCI-LY-7
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma B-cell
Attributes by original data submitter
Sample
source_name
OCI-Ly7_BCL6
cell type
OCI-Ly7 lymphoma cells
chip antibody
Bcl-6 Antibody (N-3)
chip antibody host/amount
Rabbit poly/5ug
chip antibody vendor
Santa Cruz
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer IIx
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
11321498
Reads aligned (%)
96.7
Duplicates removed (%)
30.0
Number of peaks
4193 (qval < 1E-05)
hg19
Number of total reads
11321498
Reads aligned (%)
96.2
Duplicates removed (%)
30.7
Number of peaks
4222 (qval < 1E-05)
Base call quality data from
DBCLS SRA