SRX244178
GSM1085733: MM1S MED1 500nM JQ1; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MED1

Cell type

Cell type Class
Blood
Cell type
MM.1S
Primary Tissue
Blood
Tissue Diagnosis
Multiple Myeloma

Attributes by original data submitter

Sample

source_name
Multiple myeloma
cell type
MM1.S
treated with
500nM JQ1 treatment for 6hr
chip antibody
Med1/TRAP220
chip antibody vendor
Bethyl

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
32569656
Reads aligned (%)
45.5
Duplicates removed (%)
24.8
Number of peaks
23826 (qval < 1E-05)

hg38

Number of total reads
32569656
Reads aligned (%)
46.0
Duplicates removed (%)
24.4
Number of peaks
23876 (qval < 1E-05)

Base call quality data from DBCLS SRA