Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CDK9

Cell type

Cell type Class
Blood
Cell type
MM.1S
Primary Tissue
Blood
Tissue Diagnosis
Multiple Myeloma

Attributes by original data submitter

Sample

source_name
Multiple myeloma
cell type
MM1.S
treated with
500nM JQ1 treatment for 6hr
chip antibody
Cdk9
chip antibody vendor
Santa Cruz

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
31848990
Reads aligned (%)
40.8
Duplicates removed (%)
46.1
Number of peaks
15745 (qval < 1E-05)

hg38

Number of total reads
31848990
Reads aligned (%)
41.7
Duplicates removed (%)
45.2
Number of peaks
15841 (qval < 1E-05)

Base call quality data from DBCLS SRA