Toggle navigation
ChIP-Atlas
Peak Browser
Target Genes
Colocalization
Enrichment Analysis
Publications
Docs
Advanced
Go
Find By ID
Visualize
Install and launch IGV before selecting data to visualize
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: TAL1
wikigenes
PDBj
CellType: Primary endothelial cells
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX244128
GSM1085400: ECFC Tal1 ChIP; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
TAL1
Cell type
Cell type Class
Cardiovascular
Cell type
Primary endothelial cells
NA
NA
Attributes by original data submitter
Sample
source_name
Human primary endothelial colony-forming cells
source
ECFCs derived from human umbilical cord blood
antibody
against TAL1 (C-21, Santa-Cruz)
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
185024459
Reads aligned (%)
2.4
Duplicates removed (%)
91.0
Number of peaks
4270 (qval < 1E-05)
hg38
Number of total reads
185024459
Reads aligned (%)
2.6
Duplicates removed (%)
90.4
Number of peaks
4351 (qval < 1E-05)
Base call quality data from
DBCLS SRA