SRX2433655
ChIP-seq-IgG

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

isolate
not applicable
host
not applicable
collection_date
2015-12-05
geo_loc_name
Singapore
tissue
Ovaries
sex
female

Sequenced DNA Library

library_name
HP1 ChIP-seq wt
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
52089097
Reads aligned (%)
32.2
Duplicates removed (%)
42.7
Number of peaks
6350 (qval < 1E-05)

dm3

Number of total reads
52089097
Reads aligned (%)
32.5
Duplicates removed (%)
35.8
Number of peaks
10719 (qval < 1E-05)

Base call quality data from DBCLS SRA