Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Pre-B ALL

NA

NA

Sample

source_name

Ik6 pre-B ALL + TET-empty vector

cell-line

in vitro growing pre-B ALL xenograft-derived cells

genotype/variation

Ik6,BCR-ABL1

induction time

48 hour

antibody

none

treatment

empty vector

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with antibody. According to the NEBNext ChIP-seq protocol, with 12-15 cycles of PCR.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

13895407

Reads aligned (%)

94.3

Duplicates removed (%)

10.9

Number of peaks

2116 (qval < 1E-05)

hg19

Number of total reads

13895407

Reads aligned (%)

90.0

Duplicates removed (%)

18.6

Number of peaks

1031 (qval < 1E-05)