Antigen

Antigen Class

Histone

Antigen

H3K27ac

Cell type

Cell type Class

Neural

Cell type

Neural Stem Cells

MeSH Description

Self-renewing cells that generate the main phenotypes of the nervous system in both the embryo and adult. Neural stem cells are precursors to both NEURONS and NEUROGLIA.

Sample

source_name

Sox2-deleted NSC

strain background

mixed C57BL/6 x DBA

cell type

forebrain-derived neural stem cells (NSCs)

genotype/variation

Sox2-deleted

passages

passage 3 to 7

chip antibodies

Ab4729 (Abcam) for H3K27ac

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads

37471400

Reads aligned (%)

96.9

Duplicates removed (%)

3.9

Number of peaks

20528 (qval < 1E-05)

mm9

Number of total reads

37471400

Reads aligned (%)

96.8

Duplicates removed (%)

4.0

Number of peaks

20564 (qval < 1E-05)