SRX237289
GSM1082933: INO80 IL2aCD3aCD28 ChIPseq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
INO80

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells activated by IL-2+aCD3+aCD28
cell type
CD4+ T cells
chip antibody
INO80 (Abcam, ab118787, lot GR69872-4)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
171357557
Reads aligned (%)
8.5
Duplicates removed (%)
87.1
Number of peaks
5629 (qval < 1E-05)

hg38

Number of total reads
171357557
Reads aligned (%)
9.4
Duplicates removed (%)
85.8
Number of peaks
4145 (qval < 1E-05)

Base call quality data from DBCLS SRA