Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells activated by IL-2+aCD3+aCD28
cell type
CD4+ T cells
chip antibody
RNA polymerase II (Abcam, ab5408, lot GR258-5)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
176379848
Reads aligned (%)
96.7
Duplicates removed (%)
86.2
Number of peaks
9552 (qval < 1E-05)

hg19

Number of total reads
176379848
Reads aligned (%)
95.6
Duplicates removed (%)
87.8
Number of peaks
9758 (qval < 1E-05)

Base call quality data from DBCLS SRA