SRX237284
GSM1082928: Pol2 IL2 ChIPseq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells activated by IL-2
cell type
CD4+ T cells
chip antibody
RNA polymerase II (Abcam, ab5408, lot GR258-5)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
178278316
Reads aligned (%)
96.1
Duplicates removed (%)
71.4
Number of peaks
4301 (qval < 1E-05)

hg19

Number of total reads
178278316
Reads aligned (%)
94.9
Duplicates removed (%)
73.2
Number of peaks
3148 (qval < 1E-05)

Base call quality data from DBCLS SRA