Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H2A.Z

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T cells activated by IL-2
cell type
CD4+ T cells
chip antibody
H2A.Z (Abcam, ab4174 , lot GR35527-1)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
175674800
Reads aligned (%)
93.2
Duplicates removed (%)
79.9
Number of peaks
4099 (qval < 1E-05)

hg19

Number of total reads
175674800
Reads aligned (%)
92.1
Duplicates removed (%)
81.4
Number of peaks
3347 (qval < 1E-05)

Base call quality data from DBCLS SRA