Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Liver

Cell type

Hep 3B

Primary Tissue

Liver

Tissue Diagnosis

Carcinoma

Sample

source_name

Hep3B cells

cell type

liver cancer

chip antibody

anti-Ub (FK2, millipore)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

CHIP-seq samples were prepared using the ChIP-IT kit from active motif Libraries were prepared according to Illumina's instructions accompanying the DNA Sample Kit (Part# 0801-0303).

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

42462056

Reads aligned (%)

95.4

Duplicates removed (%)

2.4

Number of peaks

7942 (qval < 1E-05)

hg19

Number of total reads

42462056

Reads aligned (%)

95.2

Duplicates removed (%)

2.5

Number of peaks

7913 (qval < 1E-05)