Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
LMO2

Cell type

Cell type Class
Blood
Cell type
Kasumi-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
LMO2 ChIP-seq
tissue
Hematopoietic
tumor stage
Acute myeloid leukemia
cell line
Kasumi-1 cells
chip antibody
anti-LMO2 (Abcam; ab81988)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
39527369
Reads aligned (%)
14.1
Duplicates removed (%)
84.0
Number of peaks
2566 (qval < 1E-05)

hg38

Number of total reads
39527369
Reads aligned (%)
15.2
Duplicates removed (%)
82.9
Number of peaks
2548 (qval < 1E-05)

Base call quality data from DBCLS SRA