Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF3

Cell type

Cell type Class
Blood
Cell type
Kasumi-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
E2A ChIP-seq
tissue
Hematopoietic
tumor stage
Acute myeloid leukemia
cell line
Kasumi-1 cells
chip antibody
anti-E2A (Santa Cruz; sc-763)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
60083223
Reads aligned (%)
51.2
Duplicates removed (%)
37.9
Number of peaks
52851 (qval < 1E-05)

hg38

Number of total reads
60083223
Reads aligned (%)
52.1
Duplicates removed (%)
37.2
Number of peaks
51416 (qval < 1E-05)

Base call quality data from DBCLS SRA