Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF12

Cell type

Cell type Class
Blood
Cell type
Kasumi-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
HEB ChIP-seq
tissue
Hematopoietic
tumor stage
Acute myeloid leukemia
cell line
Kasumi-1 cells
chip antibody
anti-HEB (Santa Cruz; sc-357)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
49563242
Reads aligned (%)
58.8
Duplicates removed (%)
31.1
Number of peaks
11671 (qval < 1E-05)

hg38

Number of total reads
49563242
Reads aligned (%)
60.1
Duplicates removed (%)
30.1
Number of peaks
11638 (qval < 1E-05)

Base call quality data from DBCLS SRA