Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RUNX1T1

Cell type

Cell type Class
Blood
Cell type
Kasumi-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
AML1-ETO ChIP-seq
tissue
Hematopoietic
tumor stage
Acute myeloid leukemia
cell line
Kasumi-1 cells
chip antibody
anti-ETO (home made, antigen-purified)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg19

Number of total reads
21093971
Reads aligned (%)
84.0
Duplicates removed (%)
12.0
Number of peaks
15921 (qval < 1E-05)

hg38

Number of total reads
21093971
Reads aligned (%)
85.4
Duplicates removed (%)
11.1
Number of peaks
16015 (qval < 1E-05)

Base call quality data from DBCLS SRA