Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
lin-35

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
Snyder_LIN-35_GFP_yA_rep1_GFP_TGCT
strain
YL402(official name : YL402 genotype : unc-119(ed3) III; vrIs56[pPIE-1::LIN-35::GFP FLAG: LIN-35 3'-UTR genotype : unc-119 (+)] outcross : 0 mutagen : None tags : GFP::3xFlag description : The LIN-35::GFP fusion protein is driven by the pie-1 promoter. made_by : Michelle Kudron in Reinke lab )
developmental stage
Young adult
genotype
unc-119(ed3) III; vrIs56[pPIE-1::LIN-35::GFP FLAG: LIN-35 3'-UTR
Sex
hermaphrodite

Sequenced DNA Library

library_name
GSM1076695: Snyder_LIN-35_GFP_yA_rep1_GFP_TGCT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

ce10

Number of total reads
2961014
Reads aligned (%)
26.8
Duplicates removed (%)
50.3
Number of peaks
167 (qval < 1E-05)

ce11

Number of total reads
2961014
Reads aligned (%)
26.8
Duplicates removed (%)
50.3
Number of peaks
167 (qval < 1E-05)

Base call quality data from DBCLS SRA