Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
NALM-6
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
Nalm6 ALL leukemia cells
cell type
pre-B ALL leukemia cells
culture condition
10% FBS RPMI1640 in 5% CO2, 37°C
ChIP
none,input

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
24685072
Reads aligned (%)
98.0
Duplicates removed (%)
7.9
Number of peaks
1171 (qval < 1E-05)

hg19

Number of total reads
24685072
Reads aligned (%)
96.9
Duplicates removed (%)
9.8
Number of peaks
1197 (qval < 1E-05)

Base call quality data from DBCLS SRA