Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
mouse ESC input
cell type
mouse embryonic stem cells
chip antibody
none (input)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
85443776
Reads aligned (%)
89.7
Duplicates removed (%)
10.1
Number of peaks
783 (qval < 1E-05)

mm9

Number of total reads
85443776
Reads aligned (%)
89.5
Duplicates removed (%)
10.1
Number of peaks
887 (qval < 1E-05)

Base call quality data from DBCLS SRA