SRX233549
GSM1080951: input DNA (reps 1-2); Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Others
Cell type
NCI-H295R
Primary Tissue
Adrenal
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
H295R/TR SF-1 cells
cell line
H295R adrenocortical tumor cell line
chip antibody
None (input control)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
22458543
Reads aligned (%)
86.8
Duplicates removed (%)
5.6
Number of peaks
1232 (qval < 1E-05)

hg19

Number of total reads
22458543
Reads aligned (%)
85.7
Duplicates removed (%)
7.4
Number of peaks
1296 (qval < 1E-05)

Base call quality data from DBCLS SRA