SRX2266667
ChIP-Seq of Homo sapiens: MV411.ENL-Y78A Flag

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
MV-4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

isolate
A 10-year-old male with biphenotypic B-myelomonocytic leukemia
age
10
biomaterial_provider
Center for Cancer Epigenetics, The University of Texas MD Anderson Cancer Center, Houston, TX, 77030, USA
sex
male
tissue
Peripheral blood
cell_line
MV411
cell_type
Macrophage
treatment
Y78A mutation

Sequenced DNA Library

library_name
MV411.ENL-Y78A_Flag
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
61961611
Reads aligned (%)
95.8
Duplicates removed (%)
3.3
Number of peaks
1987 (qval < 1E-05)

hg19

Number of total reads
61961611
Reads aligned (%)
95.1
Duplicates removed (%)
4.7
Number of peaks
1958 (qval < 1E-05)

Base call quality data from DBCLS SRA