Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Others
Cell type
Embryonic fibroblasts
NA
NA

Attributes by original data submitter

Sample

source_name
embryonic fibroblast
reprogramming stage
hiF-T
chip antibody
H3K4me3

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
8807718
Reads aligned (%)
86.0
Duplicates removed (%)
1.8
Number of peaks
18270 (qval < 1E-05)

hg19

Number of total reads
8807718
Reads aligned (%)
85.4
Duplicates removed (%)
1.9
Number of peaks
18124 (qval < 1E-05)

Base call quality data from DBCLS SRA