Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Bone Marrow Cells
MeSH Description
Cells contained in the bone marrow including fat cells (see ADIPOCYTES); STROMAL CELLS; MEGAKARYOCYTES; and the immediate precursors of most blood cells.

Attributes by original data submitter

Sample

GEO Accession
GSM1077426
tissue
bone marrow
cell type
CD71+Ter119+ cells (facs sorted)
age
8- to 12-wk-old
genotype/variation
Kap-flox/stopfloxYFP
strain
mix strain
chip antibody
IgG

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
32291534
Reads aligned (%)
84.8
Duplicates removed (%)
80.2
Number of peaks
375 (qval < 1E-05)

mm9

Number of total reads
32291534
Reads aligned (%)
84.7
Duplicates removed (%)
80.3
Number of peaks
403 (qval < 1E-05)

Base call quality data from DBCLS SRA