Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
sdc-3

Cell type

Cell type Class
Embryo
Cell type
Mixed embryo
NA
NA

Attributes by original data submitter

Sample

source_name
whole worms
strain
ERC38
developmental stage
mixed embryo
antibody target
SDC-3
antibody antigen
1067-1340aa
matching input
SE365 input ERC38 MxEmb ChIP-seq

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

ce11

Number of total reads
20627992
Reads aligned (%)
19.4
Duplicates removed (%)
13.6
Number of peaks
572 (qval < 1E-05)

ce10

Number of total reads
20627992
Reads aligned (%)
19.4
Duplicates removed (%)
13.6
Number of peaks
572 (qval < 1E-05)

Base call quality data from DBCLS SRA