Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
sdc-2

Cell type

Cell type Class
Embryo
Cell type
Mixed embryo
NA
NA

Attributes by original data submitter

Sample

source_name
whole worms
strain
TY1072
developmental stage
mixed embryo
antibody target
SDC-2
antibody antigen
1749-1848aa
matching input
SE243 input TY1072 MxEmb ChIP-seq

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

ce10

Number of total reads
11043257
Reads aligned (%)
71.3
Duplicates removed (%)
17.7
Number of peaks
637 (qval < 1E-05)

ce11

Number of total reads
11043257
Reads aligned (%)
71.3
Duplicates removed (%)
17.7
Number of peaks
638 (qval < 1E-05)

Base call quality data from DBCLS SRA