Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Larvae

Cell type

L1

NA

NA

Sample

source_name

Snyder_C16A3.4_Input_L1_rep2_CATT

strain

OP345(official name : OP345 genotype : unc119(ed3); wgIs345(C16A3.4::TY1 EGFP FLAG; unc119) outcross : 0 mutagen : None tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology in Tubiginen using Tony Hyman's recombineering pipeline. The resulting plasmid was used for bombardment transformation of an unc-119(ed3) strain. The C16A3.4::EGFP fusion protein has broad expression pattern. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the C16A3.4 transcription factor. made_by : Bob Waterston's lab from UW )

developmental stage

fed L1

genotype

unc119(ed3);wgIs345(C16A3.4::TY1 EGFP FLAG;unc119)

Sex

hermaphrodite

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

ce11

Number of total reads

9279839

Reads aligned (%)

93.9

Duplicates removed (%)

8.2

Number of peaks

579 (qval < 1E-05)

ce10

Number of total reads

9279839

Reads aligned (%)

93.9

Duplicates removed (%)

8.2

Number of peaks

585 (qval < 1E-05)