SRX220958
GSM1072709: CAL-1 input; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CAL-1
NA
NA

Attributes by original data submitter

Sample

source_name
CAL-1 cell line
cell line
CAL-1
antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
26083335
Reads aligned (%)
98.2
Duplicates removed (%)
1.9
Number of peaks
949 (qval < 1E-05)

hg19

Number of total reads
26083335
Reads aligned (%)
97.2
Duplicates removed (%)
3.6
Number of peaks
749 (qval < 1E-05)

Base call quality data from DBCLS SRA