Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Th17 Cells

MeSH Description

A subset of helper-effector T-lymphocytes which synthesize and secrete INTERLEUKINS IL-17; IL-17F; and IL-22. These cytokines are involved in host defenses and tissue inflammation in autoimmune diseases.

Sample

source_name

Th17 cells

strain

C57BL/6

cell type

Th17 cells

chip antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

mm10

Number of total reads

11276465

Reads aligned (%)

98.1

Duplicates removed (%)

4.3

Number of peaks

229 (qval < 1E-05)

mm9

Number of total reads

11276465

Reads aligned (%)

98.0

Duplicates removed (%)

5.4

Number of peaks

268 (qval < 1E-05)