Antigen

Antigen Class

TFs and others

Antigen

PSMB5

Cell type

Cell type Class

Epidermis

Cell type

CS1AN

NA

NA

Sample

source_name

CS1AN+CSBwt

cell type

dermal fibroblasts, immortolized

treatments

UV-C, 12 J/m2 + lactacystin 3h

chip antibody

PSMB5 (Santa Cruz, sc-55009)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and DNA-containing complexes were isolated with antibody. Diagenode MicroPlex Library Preparation kit v2

Sequencing Platform

instrument_model

Illumina HiSeq 4000

hg38

Number of total reads

60640083

Reads aligned (%)

92.6

Duplicates removed (%)

88.3

Number of peaks

1194 (qval < 1E-05)

hg19

Number of total reads

60640083

Reads aligned (%)

92.2

Duplicates removed (%)

89.1

Number of peaks

1322 (qval < 1E-05)