Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
Human umbilical vein endothelial cells (HUVECs)
tissue
Human umbilical vein endothelial cells (HUVECs)
passages
Passage 4
state/ treatment
Confluent, treated with Scr siRNA
chip antibody
anti-H3K27ac, Diagenode C15410174

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
64492747
Reads aligned (%)
97.2
Duplicates removed (%)
43.5
Number of peaks
69644 (qval < 1E-05)

hg19

Number of total reads
64492747
Reads aligned (%)
97.0
Duplicates removed (%)
43.5
Number of peaks
69728 (qval < 1E-05)

Base call quality data from DBCLS SRA