SRX220303
GSM1071825: Ovary shPiwi Rep2 PolII Input; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

source_name
ovary shPiwi PolII Input
biomaterial_provider
Bloomington Drosophila Stock Center
genotype/variation
shPiwi x nos-gal4; Piwi knockdown
tissue
Ovaries

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
5038105
Reads aligned (%)
74.1
Duplicates removed (%)
39.4
Number of peaks
4448 (qval < 1E-05)

dm3

Number of total reads
5038105
Reads aligned (%)
74.3
Duplicates removed (%)
37.3
Number of peaks
4092 (qval < 1E-05)

Base call quality data from DBCLS SRA