Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

source_name
ovary shPiwi H3K9me3 Input
biomaterial_provider
Bloomington Drosophila Stock Center
genotype/variation
shPiwi x nos-gal4; Piwi knockdown
tissue
Ovaries

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
24511183
Reads aligned (%)
86.5
Duplicates removed (%)
29.0
Number of peaks
10380 (qval < 1E-05)

dm3

Number of total reads
24511183
Reads aligned (%)
86.8
Duplicates removed (%)
25.7
Number of peaks
6937 (qval < 1E-05)

Base call quality data from DBCLS SRA