Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

source_name
ovary shPiwi PolII
biomaterial_provider
Bloomington Drosophila Stock Center
genotype/variation
shPiwi x nos-gal4; Piwi knockdown
tissue
Ovaries
chip-seq antibody
Anti-RNA polymerase II CTD repeat YSPTSPS (phospho S) antibody [clone 4H8]
chip-seq antibody vendor
Abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
25604892
Reads aligned (%)
91.0
Duplicates removed (%)
42.6
Number of peaks
11167 (qval < 1E-05)

dm3

Number of total reads
25604892
Reads aligned (%)
91.1
Duplicates removed (%)
41.9
Number of peaks
11444 (qval < 1E-05)

Base call quality data from DBCLS SRA