Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
Prostate cancer
NA
NA

Attributes by original data submitter

Sample

source_name
Prostate cancer patient a
tisssue
malignant prostate tumors
chip antibody
anti-AR (N20) from Santa Cruz Biotechnology (Santa Cruz, CA)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
120565559
Reads aligned (%)
83.3
Duplicates removed (%)
45.1
Number of peaks
4799 (qval < 1E-05)

hg38

Number of total reads
120565559
Reads aligned (%)
85.2
Duplicates removed (%)
44.5
Number of peaks
5215 (qval < 1E-05)

Base call quality data from DBCLS SRA