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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: AR
wikigenes
PDBj
CellType: Prostate cancer
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX220090
GSM1071291: malignant prostate tumor 2 (M2) [ChIP-exo replicate 2 ]; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
AR
Cell type
Cell type Class
Prostate
Cell type
Prostate cancer
NA
NA
Attributes by original data submitter
Sample
source_name
Prostate cancer patient d
tisssue
malignant prostate tumors
chip antibody
anti-AR (N20) from Santa Cruz Biotechnology (Santa Cruz, CA)
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
135286702
Reads aligned (%)
95.3
Duplicates removed (%)
46.6
Number of peaks
1747 (qval < 1E-05)
hg38
Number of total reads
135286702
Reads aligned (%)
97.5
Duplicates removed (%)
46.1
Number of peaks
2197 (qval < 1E-05)
Base call quality data from
DBCLS SRA